Information for 8-GCATGCTATC (Motif 20)

A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C
Reverse Opposite:
T A C G C G T A A C G T C G T A A C T G A G T C G T C A C G A T A C T G A G T C
p-value:1e-7
log p-value:-1.661e+01
Information Content per bp:1.864
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.5 +/- 26.5bp
Average Position of motif in Background60.7 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCTATC---
NNTCCTGCTGTGNNN
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCTATC---
TNTCCTGCTGTGNNG
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCATGCTATC
TBGCACGCAA--
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCATGCTATC
---NGCTN--
 A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCTATC---
TCNCCTGCTGNGNNN
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCATGCTATC-
-CCTGCTGAGH
 A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCATGCTATC--
AGATGCAATCCC
 A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C A C G T A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

NRF(NRF)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCATGCTATC
GTGCGCATGCGC--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCATGCTATC------
ACATGCTACCTAATAC
 A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCATGCTATC
TGCGTG-----
 A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C G T T C G A A C G T A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T