Information for 1-GCCCAGAGACAGA (Motif 1)

C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
Reverse Opposite:
A C G T A T G C A C G T A C T G A G C T A G T C A C G T A G T C A G C T A C T G C T A G A T C G A G T C
p-value:1e-13
log p-value:-3.015e+01
Information Content per bp:1.769
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif38.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets40.1 +/- 23.3bp
Average Position of motif in Background52.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGAGACAGA
TGCCCAGNHW----
 A C G T C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGAGACAGA
CCGCCCAAGGGCAG-
 A C G T A C G T C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCCAGAGACAGA
--CCAGGAACAG-
 C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGAGACAGA
TGCCCCAGGGCA--
 A C G T C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGAGACAGA
TGCCCCAGGGCA--
 A C G T C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGAGACAGA
TGCCCCCGGGCA--
 A C G T C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGAGACAGA
GTCCCCAGGGGA---
 A C G T A C G T C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCCCAGAGACAGA
SCCTAGCAACAG-
 C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCCCAGAGACAGA
--CCAGACAG---
 C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCCCAGAGACAGA
--CCAGACRSVB-
 C T A G A T G C G A T C A G T C C T G A C T A G C G T A T A C G C T G A T A G C G T C A A T C G G T C A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T