p-value: | 1e-14 |
log p-value: | -3.241e+01 |
Information Content per bp: | 1.947 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.90% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 49.2 +/- 18.3bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LIN54/MA0619.1/Jaspar
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTTTGAATTTGAA ATTTGAATT---- |
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PB0068.1_Sox1_1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTTGAATTTGAA NNNTATTGAATTGNNN |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTTTGAATTTGAA -TTTGAAACCG-- |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTTGAATTTGAA- NTTNTATGAATGTGNNC |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTTGAATTTGAA-- ATTTGCATAACAAAG |
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Esrra/MA0592.2/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTTTGAATTTGAA --ATGACCTTGAA |
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OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTTTGAATTTGAA-- ATTTGCATAACAATG |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTTTGAATTTGAA -NATGACCTTGA- |
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PH0144.1_Pou2f2/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTTTGAATTTGAA----- --TNTAATTTGCATANNN |
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PB0171.1_Sox18_2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTTTGAATTTGAA-- GGACTGAATTCATGCC |
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