p-value: | 1e-8 |
log p-value: | -2.040e+01 |
Information Content per bp: | 1.924 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.60% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 62.8 +/- 12.0bp |
Average Position of motif in Background | 74.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
GCM2/MA0767.1/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTGCGGGTGAAG TATGCGGGTA--- |
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GCM1/MA0646.1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTGCGGGTGAAG CATGCGGGTAC-- |
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PB0024.1_Gcm1_1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCTGCGGGTGAAG NNNNATGCGGGTNNNN |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GCTGCGGGTGAAG- --------NGAAGC |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCTGCGGGTGAAG-- CGCGCCGGGTCACGTA |
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ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCTGCGGGTGAAG-- SMCAGTCWGAKGGAGGAGGC |
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Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTGCGGGTGAAG -SDGCAGGTGCNS |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCTGCGGGTGAAG-- AGAGCGGGGTCAAGTA |
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Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTGCGGGTGAAG- --RGKGGGCGGAGC |
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E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTGCGGGTGAAG --NNCAGGTGNN- |
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