Information for 7-GRAAATTMACCTTGAW (Motif 11)

A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
Reverse Opposite:
G C T A A C G T A G T C C G T A T C G A T A C G A C T G A C G T A C T G C G T A C G T A A C G T A C G T C A G T A G T C T A G C
p-value:1e-11
log p-value:-2.631e+01
Information Content per bp:1.743
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 20.2bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GRAAATTMACCTTGAW
----NATGACCTTGA-
 A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
A C G T A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GRAAATTMACCTTGAW
-----ATGACCTTGAA
 A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
A C G T A C G T A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GRAAATTMACCTTGAW
GGAAATTCCC------
 A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GRAAATTMACCTTGAW--
-NNNNATGACCTTGANTN
 A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T A C G T A C G T
A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GRAAATTMACCTTGAW
-----ATGACCTTGA-
 A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GRAAATTMACCTTGAW
------TGACCTTGAV
 A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GRAAATTMACCTTGAW
-----NTGACCTTGA-
 A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GRAAATTMACCTTGAW
GGAAATTCCC------
 A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GRAAATTMACCTTGAW
------TGACCTTGAN
 A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PH0024.1_Dlx5/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GRAAATTMACCTTGAW
GGGGTAATTAGCTCTG--
 A C G T A C G T A T C G C T A G G T C A C G T A G T C A C G A T A C G T G T A C G T C A T G A C A T G C A G C T A C G T A C T G G T C A C G A T
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G A C G T A C G T