Information for 6-CTGTWAATGAATCTAA (Motif 8)

G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
Reverse Opposite:
G C A T A C G T C G T A A C T G G T C A C G A T A C G T A T G C C G T A C G A T A C G T C G A T C G T A A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.310e+01
Information Content per bp:1.784
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.5 +/- 19.9bp
Average Position of motif in Background38.8 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTGTWAATGAATCTAA
AGGACGCTGTAAAGGGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGTWAATGAATCTAA
--GTTAATNATTAA--
 G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
A C G T A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGTWAATGAATCTAA
ACTATGAATGAATGAT-
 A C G T G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTGTWAATGAATCTAA
AAGACGCTGTAAAGCGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T A C G T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTGTWAATGAATCTAA
AAGACGCTGTAAAGCGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGTWAATGAATCTAA
NCTGTCAATCAN-----
 A C G T G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTGTWAATGAATCTAA
--GTTAATGATTAAC-
 G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
A C G T A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTWAATGAATCTAA
WATGCAAATGAG-----
 A C G T G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGTWAATGAATCTAA
-NGTTAATNATTAACN
 G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
A C G T C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGTWAATGAATCTAA
GSCTGTCACTCA------
 A C G T A C G T G T A C A C G T A C T G A C G T C G A T C G T A C G T A A C G T A T C G C G T A C G T A A C G T T A G C C G A T G T C A C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T