Information for 9-ACACATACACACA (Motif 27)

C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A
Reverse Opposite:
A G C T C A T G A G C T C T A G A C G T C T A G A G C T C T G A A C G T C T A G C G A T C T A G A G C T
p-value:1e-2
log p-value:-6.094e+00
Information Content per bp:1.808
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif101.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets63.7 +/- 25.1bp
Average Position of motif in Background48.7 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACACATACACACA--
GACCACATTCATACAAT
 A C G T A C G T C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACACATACACACA
AGCGGCACACACGCAA-
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACACATACACACA-----
--CGAAGCACACAAAATA
 C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACACATACACACA
GGACACACCCCC---
 A C G T A C G T C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ACACATACACACA
---CRCCCACGCA
 C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A
A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACACATACACACA----
--ATTTGCATACAATGG
 C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACACATACACACA
YATGCATATRCATRT-
 A C G T A C G T A C G T C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ACACATACACACA
--AAATAAACA--
 C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ACACATACACACA---
TACATGTGCACATAAAA
 A C G T C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:ACACATACACACA
-------CACGCA
 C T G A A G T C C G T A A G T C C G T A A G C T C T G A A G T C C G T A A G T C C T G A G T A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A