Information for 5-AARGGCTTKCTGM (Motif 17)

C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A A C T G G T A C C G T A C G T A A C T G A G T C A G T C G A C T A C G T A C G T
p-value:1e-8
log p-value:-1.855e+01
Information Content per bp:1.893
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.0 +/- 18.3bp
Average Position of motif in Background66.0 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AARGGCTTKCTGM
---CACTTCCTGT
 C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AARGGCTTKCTGM
---GGCGCGCT--
 C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AARGGCTTKCTGM--
-----CCTGCTGAGH
 C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AARGGCTTKCTGM-
----ACTTCCTGTT
 C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AARGGCTTKCTGM-
----ATTTCCTGTN
 C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AARGGCTTKCTGM
AGAAATGACTTCCCT-
 A C G T A C G T A C G T C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AARGGCTTKCTGM----
--NNTCCTGCTGTGNNN
 C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AARGGCTTKCTGM----
--TNTCCTGCTGTGNNG
 C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AARGGCTTKCTGM-
----ACTTCCTGNT
 C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AARGGCTTKCTGM----
--TCNCCTGCTGNGNNN
 C G T A C G T A C T A G A C T G C T A G A G T C A C G T A C G T A C T G A G T C A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G