Information for 3-WCCMRGAAWSCAT (Motif 11)

C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T C T A G A T C G C G T A A C G T A C G T A G T C A G T C C A G T A C T G A T C G C G A T
p-value:1e-9
log p-value:-2.118e+01
Information Content per bp:1.834
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.6 +/- 21.9bp
Average Position of motif in Background45.2 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-WCCMRGAAWSCAT--
TACCCACAATGCATTG
 A C G T C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:WCCMRGAAWSCAT
-CCWGGAATGY--
 C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--WCCMRGAAWSCAT
TTTCCTGGAAAGNNN
 A C G T A C G T C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---WCCMRGAAWSCAT
ATTTCCAAGAA-----
 A C G T A C G T A C G T C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--WCCMRGAAWSCAT
TTTCCTGGAAA----
 A C G T A C G T C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:WCCMRGAAWSCAT
-CCWGGAATGY--
 C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---WCCMRGAAWSCAT
ATTTCCCAGVAKSCY-
 A C G T A C G T A C G T C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----WCCMRGAAWSCAT
TGAATTCCTAGAAAGCA-
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-WCCMRGAAWSCAT
TTCCNGGAAG----
 A C G T C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--WCCMRGAAWSCAT
TTTCCTAGAAAGCA-
 A C G T A C G T C G T A A T G C A G T C G T A C C T A G A C T G C G T A C G T A C G A T A T G C A G T C C G T A A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T