Information for 9-TGCTCAGTGGCTT (Motif 9)

A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A G T C C G T A A G T C C G A T A C T G C G T A C T A G G T A C C G T A
p-value:1e-13
log p-value:-3.081e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.3 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0115.1_Nkx2-6/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCAGTGGCTT-
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCTCAGTGGCTT
--GTCTGTGGTTT
 A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCAGTGGCTT-
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCTCAGTGGCTT
---NNTGTGGTTT
 A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCAGTGGCTT--
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCTCAGTGGCTT--
---TGATTGGCTANN
 A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCTCAGTGGCTT
--CCGATTGGCT-
 A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGCTCAGTGGCTT
-CTTGAGTGGCT-
 A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGCTCAGTGGCTT--
---NNTGTGGATTSS
 A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCAGTGGCTT--
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G