Information for 12-TCATCAAATG (Motif 25)

A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A
p-value:1e-6
log p-value:-1.589e+01
Information Content per bp:1.959
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.8 +/- 7.5bp
Average Position of motif in Background53.3 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TCATCAAATG
--ATTAAA--
 A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TCATCAAATG----
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TCATCAAATG----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TCATCAAATG----
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCATCAAATG----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCATCAAATG
GTCGTAAAAT-
 A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCATCAAATG--
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCATCAAATG--
ACATCAAAGGNA
 A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCATCAAATG
NCYAATAAAA--
 A C G T A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TCATCAAATG-
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A