Information for 7-CAACTCAGAC (Motif 14)

A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C
Reverse Opposite:
A T C G C G A T T A G C A C G T A C T G C T G A C T A G C A G T A C G T A C T G
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.847
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.8 +/- 23.0bp
Average Position of motif in Background22.4 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CAACTCAGAC--
----CCAGACAG
 A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAACTCAGAC----
----CCAGACRSVB
 A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAACTCAGAC------
CAAATCCAGACATCACA
 A C G T A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAACTCAGAC--
----BCAGACWA
 A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAACTCAGAC-
-ATGCCAGACN
 A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

POL002.1_INR/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAACTCAGAC--
----TCAGTCTT
 A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAACTCAGAC--
----TCACACCT
 A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAACTCAGAC
ATCACCCCAT--
 A C G T A C G T A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAACTCAGAC--
----TCACACCT
 A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CAACTCAGAC
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G C T A A G T C A G C T A G T C G T C A A C T G C G T A A T G C
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A