Information for 19-TCSGGCGCCK (Motif 22)

C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G
Reverse Opposite:
G T A C C A T G A T C G G A T C A T C G A T G C G A T C T A C G A C T G G C T A
p-value:1e-6
log p-value:-1.546e+01
Information Content per bp:1.652
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif211.9
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets51.5 +/- 26.8bp
Average Position of motif in Background51.8 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCSGGCGCCK
-AGCGCGCC-
 C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCSGGCGCCK
--CGGAGC--
 C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCSGGCGCCK--
TTTGGCGCCAAA
 C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCSGGCGCCK-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCSGGCGCCK----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCSGGCGCCK----
NTCGCGCGCCTTNNN
 A C G T C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCSGGCGCCK----
TTGGGGGCGCCCCTAG
 A C G T A C G T C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCSGGCGCCK----
ANCGCGCGCCCTTNN
 A C G T C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCSGGCGCCK
GCGCCTGCGCA-
 A C G T A C G T C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCSGGCGCCK--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T C G A T G T A C A T G C C T A G A T C G T A G C C T A G A T G C G T A C C A T G A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C