Information for 9-CMTGCGTTTC (Motif 38)

A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C
Reverse Opposite:
C T A G T G C A C G T A C G T A A G T C A C T G A G T C C G T A A C G T A C T G
p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets47.7 +/- 17.5bp
Average Position of motif in Background59.4 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CMTGCGTTTC-
ACTTTCGTTTCT
 A C G T A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CMTGCGTTTC
-TTGCGGTTT
 A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CMTGCGTTTC
NNACTTGCCTT--
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CMTGCGTTTC
--TGCGTG--
 A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CMTGCGTTTC-------
--TNAGTTTCGATTTTN
 A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CMTGCGTTTC
CCATGTGCTT-
 A C G T A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CMTGCGTTTC
TTTGCGGTTT
 A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CMTGCGTTTC----
CCTTGCAATTTTTNN
 A C G T A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CMTGCGTTTC-
-CTGTGGTTTN
 A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CMTGCGTTTC
NAACATATGTTT-
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G G T A C C T A G A C G T A C G T A C G T G A T C
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T