Information for 12-CHTCTGCCCTTTAACA (Motif 21)

G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A
Reverse Opposite:
C G A T A C T G G A C T A G C T T G C A G C T A C T G A C T A G A C T G A T C G G T A C C G T A T C A G T C G A C G T A C T A G
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.626
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif202.2
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets44.4 +/- 23.1bp
Average Position of motif in Background52.6 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CHTCTGCCCTTTAACA
---CTGACCTTTG---
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CHTCTGCCCTTTAACA-
--GCTGACCTTGAACTN
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A A C G T
A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CHTCTGCCCTTTAACA--
----TGACCTTTGACCTN
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CHTCTGCCCTTTAACA
----TGACCTTGACCT
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CHTCTGCCCTTTAACA--
----TGACCTTTGACCTC
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CHTCTGCCCTTTAACA--
----TGACCTTTGACCCC
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CHTCTGCCCTTTAACA--
----TGACCTTTGCCCCA
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CHTCTGCCCTTTAACA---
----TGACCTTTGCCCTAN
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CHTCTGCCCTTTAACA--
----TGACCTTTGACCCC
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CHTCTGCCCTTTAACA--
----TGACCTTTGACCCC
 G A T C G C A T A G C T A G T C C G A T A C T G T A G C G T A C A G T C A G C T C G A T A C G T T C G A C T G A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C