Information for 11-CGGRAGAGAC (Motif 35)

A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
Reverse Opposite:
T A C G A C G T A G T C C A G T A T G C A C G T G A C T A G T C A G T C A C T G
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.804
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif69.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets47.7 +/- 22.3bp
Average Position of motif in Background47.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gabpa/MA0062.2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CGGRAGAGAC
CCGGAAGTGGC
 A C G T A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGGRAGAGAC--
CGGAAGTGAAAC
 A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C A C G T A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

ELK4/MA0076.2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGGRAGAGAC
NCCGGAAGTGG-
 A C G T A C G T A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGGRAGAGAC
RCCGGAAGTD--
 A C G T A C G T A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGGRAGAGAC
AGCGGAAGTG--
 A C G T A C G T A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGGRAGAGAC
ANCCGGAAGT---
 A C G T A C G T A C G T A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGGRAGAGAC
RCCGGAARYN--
 A C G T A C G T A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T

PB0011.1_Ehf_1/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CGGRAGAGAC
AGGACCCGGAAGTAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGGRAGAGAC
ACCGGAAG----
 A C G T A C G T A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGGRAGAGAC
ACCGGAAGTG--
 A C G T A C G T A G T C C T A G A C T G C T G A G T C A T A C G G T C A A C T G C G T A A T G C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T