Information for 14-CTGAACTGSAAGC (Motif 27)

A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
Reverse Opposite:
A C T G A G T C A G C T C A G T T A G C G T A C C T G A A C T G C G A T A C G T A T G C C G T A C T A G
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.699
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif29.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets42.7 +/- 26.6bp
Average Position of motif in Background48.7 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGAACTGSAAGC
-TGACCTTGAT--
 A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAACTGSAAGC
ATGACCTTGAA--
 A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGAACTGSAAGC
---AACCGANA--
 A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGAACTGSAAGC
CGGAAGTGAAAC-
 A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGAACTGSAAGC
-TGACCT------
 A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGAACTGSAAGC
-GGAAGTGAAAST
 A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGAACTGSAAGC
NTGACCTTGA---
 A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGAACTGSAAGC
-CCAACTGCCA--
 A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGAACTGSAAGC
NATGACCTTGA---
 A C G T A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTGAACTGSAAGC
---AACCGGAAGT
 A G T C C G A T A T C G C G T A G C T A G T A C A G C T C A T G A T C G G T C A C T G A C T A G G T A C
A C G T A C G T A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T