Information for 11-TTCTRTRTGCRTR (Motif 20)

A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A
Reverse Opposite:
A G C T C G T A A G C T C T A G A G T C C G T A A G C T C G T A A G T C C G T A A C T G C G T A C G T A
p-value:1e-10
log p-value:-2.345e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.1 +/- 14.2bp
Average Position of motif in Background64.0 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCTRTRTGCRTR----
TNNATTATGCATANNTT
 A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTCTRTRTGCRTR-
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTCTRTRTGCRTR
CTTTCANTATGACTV
 A C G T A C G T A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCTRTRTGCRTR----
NTNTATGTGCACATNNN
 A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTCTRTRTGCRTR-
-TTCATTTGCATAT
 A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTCTRTRTGCRTR-
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTCTRTRTGCRTR-
----ATTTGCATAT
 A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTCTRTRTGCRTR-
----ATTTGCATAA
 A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCTRTRTGCRTR---
TNTAATTTGCATANNN
 A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTCTRTRTGCRTR
AYATGYATATGCATR
 A C G T A C G T A C G T A C G T G T A C A C G T T C A G A C G T C T G A A C G T A C T G A G T C C T G A A C G T C T G A
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G