Information for 12-AGTGAAGAGATTAGCA (Motif 18)

C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A
Reverse Opposite:
A C G T A T C G G T A C G C A T C G T A C G T A C G A T A T G C C G A T G T A C A G C T G A C T A G T C G C T A A G T C A G C T
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.666
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif79.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets51.4 +/- 25.3bp
Average Position of motif in Background53.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0021.1_Gata3_1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGTGAAGAGATTAGCA------
TTTTTAGAGATAAGAAATAAAG
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGTGAAGAGATTAGCA
-----ANAGATAAGAA
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

PB0023.1_Gata6_1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGTGAAGAGATTAGCA---
--TATAGAGATAAGAATTG
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGTGAAGAGATTAGCA
-BTBRAGTGSN-----
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGTGAAGAGATTAGCA---
-----NCAGATAAGAANNN
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGTGAAGAGATTAGCA
---GCAGTGATTT---
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGTGAAGAGATTAGCA
--TTGAGTGSTT----
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGTGAAGAGATTAGCA--
-TTAGAGGGATTAACAAT
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A A C G T A C G T
A C G T G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AGTGAAGAGATTAGCA--
------CTCATTTGCATW
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGTGAAGAGATTAGCA
-CTYRAGTGSY-----
 C T G A C T A G C G A T C T A G C T G A C T G A A C T G G C T A A T C G G C T A A C G T C G A T C G T A A C T G T A G C C G T A
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T