Information for 5-GCTYCGCSKTSTT (Motif 12)

A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T
Reverse Opposite:
C G T A G T C A A T G C C G T A T G C A A T C G A C T G A G T C A C T G C T A G C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 10.7bp
Average Position of motif in Background54.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTYCGCSKTSTT
GCTCCG-------
 A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTYCGCSKTSTT
GCTCCGCCCMCY-
 A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTYCGCSKTSTT-
--GCCGCCATCTTG
 A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTYCGCSKTSTT-
--GCNGCCATCTTG
 A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTYCGCSKTSTT
GCTTCC-------
 A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCTYCGCSKTSTT
GGCCCCGCCCCC--
 A C G T A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTYCGCSKTSTT
NGCTN---------
 A C G T A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCTYCGCSKTSTT
NAGCCCCGCCCCCN-
 A C G T A C G T A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCTYCGCSKTSTT
-GTCCGCCATTA-
 A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCTYCGCSKTSTT
NRGCCCCRCCCHBNN
 A C G T A C G T A C T G A G T C A C G T A G T C A G T C A C T G A G T C A T G C A C G T A C G T A T C G A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C