Information for 4-CAGRCATGTAAMA (Motif 11)

A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C T G A G T A C C G T A A C G T A C T G A G T C A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.759e+01
Information Content per bp:1.915
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 31.7bp
Average Position of motif in Background38.0 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGRCATGTAAMA--
AATATACATGTAAAACA
 A C G T A C G T A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGRCATGTAAMA--
AAAATACATGTAATACT
 A C G T A C G T A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGRCATGTAAMA--
AATATACATGTAAAATT
 A C G T A C G T A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGRCATGTAAMA
AAGGCAAGTGT--
 A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGRCATGTAAMA--
TAAATACATGTAAAATT
 A C G T A C G T A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGRCATGTAAMA--
AATATACATGTAATATA
 A C G T A C G T A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGRCATGTAAMA--
AAAATACATGTAAAAAT
 A C G T A C G T A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGRCATGTAAMA
CCWGGAATGY----
 A C G T A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAGRCATGTAAMA--
----AATGTATCAAT
 A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CAGRCATGTAAMA
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G T C A G A G T C C G T A A C G T A C T G A G C T C G T A C G T A G T C A C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T