Information for 1-YASYGCCMYCTAGTGG (Motif 1)

A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G T C A A T G C A G C T C G T A A C T G C T A G C A G T A C T G A C T G G A T C T C A G T A C G G C A T T C G A
p-value:1e-49
log p-value:-1.142e+02
Information Content per bp:1.722
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.61%
Number of Background Sequences with motif70.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets54.3 +/- 19.9bp
Average Position of motif in Background53.7 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-YASYGCCMYCTAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:YASYGCCMYCTAGTGG---
TAGCGCCCCCTGGTGGCCA
 A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---YASYGCCMYCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.61
Offset:12
Orientation:reverse strand
Alignment:YASYGCCMYCTAGTGG--
------------GTGGAT
 A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:YASYGCCMYCTAGTGG
----GCCATCTGTT--
 A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:YASYGCCMYCTAGTGG-
-------NTCAAGTGGN
 A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YASYGCCMYCTAGTGG-------
------NNANTGGTGGTCTTNNN
 A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:YASYGCCMYCTAGTGG
----GCCAGCTGBTNB
 A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:YASYGCCMYCTAGTGG
-GCCGCCATCTTG---
 A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:YASYGCCMYCTAGTGG--
---GGCCYCCTGCTGDGH
 A G C T C G T A A T G C A G T C C A T G G T A C A G T C G T C A A G T C G T A C C G A T C T G A T A C G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C