Information for 21-GGGWTTTCMC (Motif 43)

C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C
Reverse Opposite:
T A C G C A T G T C A G T C G A G C T A T G C A G C A T A G T C A G T C G T A C
p-value:1e-6
log p-value:-1.471e+01
Information Content per bp:1.547
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif70.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets56.5 +/- 25.2bp
Average Position of motif in Background47.8 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGGWTTTCMC
GGGAATTTCC-
 A C G T C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GGGWTTTCMC
NGGGGATTTCCC
 A C G T A C G T C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGGWTTTCMC
GGGGATTTCC-
 A C G T C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGGWTTTCMC
GGGGATTTCC-
 A C G T C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGGWTTTCMC
GGGAATTTCC-
 A C G T C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGWTTTCMC-
GGGGATTCCCCC
 A C G T C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGWTTTCMC---
---HTTTCCCASG
 C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGWTTTCMC----
--ACTTTCACTTTC
 C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGGWTTTCMC
---TTTTCCA
 C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFKB2/MA0778.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGWTTTCMC-
AGGGGATTCCCCT
 A C G T A C G T C A T G T C A G T C A G C G T A A C G T C G A T A G C T A G T C G T A C A T G C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T