Information for 16-AGCGAGSCCT (Motif 36)

G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T
Reverse Opposite:
C T G A A T C G C T A G T A G C A T G C A G C T G T A C C T A G T A G C A C G T
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.698
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.06%
Number of Background Sequences with motif547.7
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets50.5 +/- 23.9bp
Average Position of motif in Background48.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGCGAGSCCT
--CNAGGCCT
 G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AGCGAGSCCT
--CTAGGCCT
 G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGCGAGSCCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCGAGSCCT---
SCAGYCADGCATGAC
 A C G T A C G T G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCGAGSCCT----
NNGGCGACACCTCNNN
 A C G T A C G T G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCGAGSCCT----
GCAGCCAAGCGTGACN
 A C G T A C G T G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T A C G T A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCGAGSCCT
AGCGCGCC--
 G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGCGAGSCCT-----
NNNNTGAGCACTGTNNG
 A C G T A C G T G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGCGAGSCCT--
TTGACCGAGAATTCC
 A C G T A C G T A C G T G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCGAGSCCT---
NNGGCCACGCCTTTN
 A C G T A C G T G T C A A T C G G A T C A C T G C T G A A T C G A T C G A G T C T A G C A G C T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G