Information for 24-TTCGGCGCCHTAG (Motif 33)

A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G
Reverse Opposite:
A G T C A G C T C T G A C G T A A C T G A C T G A G T C A C T G A G T C G T A C A C T G G T C A C G T A
p-value:1e-9
log p-value:-2.214e+01
Information Content per bp:1.866
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.6 +/- 23.1bp
Average Position of motif in Background49.2 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTCGGCGCCHTAG
TTTGGCGCCAAA-
 A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTCGGCGCCHTAG--
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTCGGCGCCHTAG--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTCGGCGCCHTAG
---GGCGCGCT--
 A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTCGGCGCCHTAG---
-----AGCCTCAGGCA
 A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TTCGGCGCCHTAG---
-----AGCCTCAGGCA
 A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTCGGCGCCHTAG-
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TTCGGCGCCHTAG---
-----CGCCTCAGGCA
 A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTCGGCGCCHTAG-
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TTCGGCGCCHTAG-----
------GCCTCAGGGCAT
 A C G T A C G T A G T C A C T G A C T G G T A C A C T G A G T C A G T C G A C T A G C T C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T