Information for 2-TTGCCGCGACCAGACA (Motif 2)

A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A C G T A C T G A C T G G A C T A G T C A C T G G A T C A C T G A C T G G A T C C G T A C G T A
p-value:1e-32
log p-value:-7.520e+01
Information Content per bp:1.968
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 26.8bp
Average Position of motif in Background16.4 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TTGCCGCGACCAGACA-----
----CAAATCCAGACATCACA
 A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:TTGCCGCGACCAGACA-
---------CCAGACAG
 A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTGCCGCGACCAGACA-
-----GCGACCACACTG
 A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:TTGCCGCGACCAGACA---
---------CCAGACRSVB
 A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:TTGCCGCGACCAGACA-
---------BCAGACWA
 A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TTGCCGCGACCAGACA
------CGTCTAGACA
 A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTGCCGCGACCAGACA
DTTTCCCGCC--------
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTGCCGCGACCAGACA
-GGCCACRCCCMK---
 A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TTGCCGCGACCAGACA
----GGCGACCACCGA
 A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TTGCCGCGACCAGACA
TTTTCGCGCGAA------
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C C T A G A G T C A C T G C T G A A G T C A G T C C G T A A C T G C G T A A G T C C G T A
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T