Information for 5-TATATAAGCG (Motif 18)

C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G
Reverse Opposite:
A T G C A C T G A G T C A G C T G A C T C G T A G C A T C T G A G C A T G T C A
p-value:1e-13
log p-value:-3.013e+01
Information Content per bp:1.677
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif329.3
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets47.5 +/- 24.5bp
Average Position of motif in Background49.4 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBP/MA0108.2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TATATAAGCG----
GTATAAAAGGCGGGG
 A C G T C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TATATAAGCG----
GTATAAAAGGCGGGG
 A C G T C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TATATAAGCG
GNCTATAAAAGG-
 A C G T A C G T A C G T C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TATATAAGCG
NANTTATATATAANGN
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TATATAAGCG
RTTATGYAAB--
 A C G T A C G T C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TATATAAGCG
-AGATAAGA-
 C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G
A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TATATAAGCG
ANGTTACATAA---
 A C G T A C G T A C G T A C G T C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T

PB0184.1_Tbp_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TATATAAGCG---
CCGATTTAAGCGACC
 A C G T A C G T C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G A C G T A C G T A C G T
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TATATAAGCG
TTTTATKRGG-
 A C G T C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TATATAAGCG---
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T C A G T C G T A A G C T C G T A G C A T C T G A T C G A C T A G T G A C T A C G A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T