Information for 8-GYTYMKTKSKRGCCRT (Motif 11)

A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T
Reverse Opposite:
C G T A A G C T A C T G A C T G A G T C G A T C G T A C A T C G G T C A C G T A G T A C C A T G C T G A C G T A C T A G A G T C
p-value:1e-18
log p-value:-4.161e+01
Information Content per bp:1.784
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.9 +/- 18.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.50
Offset:10
Orientation:forward strand
Alignment:GYTYMKTKSKRGCCRT----
----------GGCCATTAAC
 A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GYTYMKTKSKRGCCRT-
-----TTTGGCGCCAAA
 A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:GYTYMKTKSKRGCCRT----
--------GCNGCCATCTTG
 A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GYTYMKTKSKRGCCRT
GGGTTACTANAGGTCA-
 A C G T A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:GYTYMKTKSKRGCCRT---
--NNNNTTGGCGCCGANNN
 A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:6
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----GYTYMKTKSKRGCCRT
NNGAGGTTACTNNAGGTCA-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:GYTYMKTKSKRGCCRT---
--NNNNTTGGCGCCGANNN
 A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

YY2/MA0748.1/Jaspar

Match Rank:8
Score:0.46
Offset:7
Orientation:forward strand
Alignment:GYTYMKTKSKRGCCRT--
-------GTCCGCCATTA
 A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.45
Offset:4
Orientation:reverse strand
Alignment:GYTYMKTKSKRGCCRT
----DTTTCCCGCC--
 A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T
A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.45
Offset:3
Orientation:forward strand
Alignment:GYTYMKTKSKRGCCRT
---VDTTTCCCGCCA-
 A C T G A G T C A C G T A G C T G T A C A C T G A C G T A C G T A T G C A C T G C T A G A C T G A G T C A G T C C T G A A C G T
A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T