p-value: | 1e-7 |
log p-value: | -1.634e+01 |
Information Content per bp: | 1.697 |
Number of Target Sequences with motif | 15.0 |
Percentage of Target Sequences with motif | 1.93% |
Number of Background Sequences with motif | 158.3 |
Percentage of Background Sequences with motif | 0.33% |
Average Position of motif in Targets | 50.5 +/- 25.3bp |
Average Position of motif in Background | 51.3 +/- 28.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ARGGCAGCCTGTG ---BCAGACWA-- |
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PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ARGGCAGCCTGTG- VAGRACAKNCTGTBC |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | ARGGCAGCCTGTG -------GCTGTG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ARGGCAGCCTGTG ---CCAGACAG-- |
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ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ARGGCAGCCTGTG-- NAGAACAGNCTGTNCT |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ARGGCAGCCTGTG ---CCAGACRSVB |
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GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ARGGCAGCCTGTG--- AGNACANNNTGTNCTN |
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GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ARGGCAGCCTGTG- VAGRACAKWCTGTYC |
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Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ARGGCAGCCTGTG ---ACTTCCTGTT |
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PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ARGGCAGCCTGTG- AAGAACATWHTGTTC |
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