Information for 20-TCCAAGTBGCTCC (Motif 36)

A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A C T G A G T C T C A G C G T A A G T C A C G T A C G T A C T G C T A G C T G A
p-value:1e-7
log p-value:-1.695e+01
Information Content per bp:1.849
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 27.1bp
Average Position of motif in Background57.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Creb3l2/MA0608.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCCAAGTBGCTCC
-ACACGTGGC---
 A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCAAGTBGCTCC
-CCACGTGGNN--
 A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCAAGTBGCTCC
-CCATGTGCTT--
 A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCCAAGTBGCTCC
-CCACGTGGNN--
 A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCAAGTBGCTCC
KCCACGTGAC---
 A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCCAAGTBGCTCC
-TCACGTGACC--
 A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCCAAGTBGCTCC
--CACGTGGC---
 A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCAAGTBGCTCC
--CACGTGDC---
 A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCAAGTBGCTCC
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

USF1/MA0093.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCCAAGTBGCTCC
GCCACGTGACC--
 A G C T A G T C A G T C C G T A G T C A A C T G A C G T A G T C C T A G A G T C A C G T A T G C A G T C
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T