Information for 15-ACAGAACAKYTWC (Motif 30)

C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C
Reverse Opposite:
A C T G G C A T G T C A C T G A G T A C A C G T A C T G A C G T A C G T G T A C A G C T A C T G C G A T
p-value:1e-9
log p-value:-2.081e+01
Information Content per bp:1.784
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.1 +/- 27.6bp
Average Position of motif in Background47.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACAGAACAKYTWC
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACAGAACAKYTWC
NTTNAGAACAATTA-
 A C G T A C G T C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACAGAACAKYTWC
CCAGGAACAG----
 A C G T C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACAGAACAKYTWC---
GAAGAACAGGTGTCCG
 C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C A C G T A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACAGAACAKYTWC
----AACAGCTG-
 C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAGAACAKYTWC--
TTAAGAACAATAAATT
 A C G T C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAGAACAKYTWC--
TTTAGAACAATAAAAT
 A C G T C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAACAKYTWC
NNCNNAACAATTNT
 A C G T C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACAGAACAKYTWC--
----AACAGCTGCAG
 C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACAGAACAKYTWC
ATGTCACAACAACAC-
 A C G T A C G T A C G T C G T A A G T C C T G A A C T G C G T A C G T A A G T C G T C A A C T G A G C T A C G T C G T A G T A C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T