Information for 14-GCAAAAGTCTCGC (Motif 29)

T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C
Reverse Opposite:
C A T G T G A C A T C G C G T A C A T G G T C A A G T C C G A T A C G T A G C T A G C T C T A G A G T C
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.702
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif73.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets64.2 +/- 26.8bp
Average Position of motif in Background49.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAAAAGTCTCGC
NNATAAGGNN---
 T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCAAAAGTCTCGC
--AAAAGTCAA--
 T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCAAAAGTCTCGC
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCAAAAGTCTCGC
ANGNAAAGGTCA---
 A C G T A C G T T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAAGTCTCGC
CAATTGCAAAAATAT---
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCAAAAGTCTCGC----
-----TGTCTGDCACCT
 T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCAAAAGTCTCGC
AAAACAAAGG------
 A C G T A C G T A C G T T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAGTCTCGC
RACAAWGG------
 A C G T T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCAAAAGTCTCGC-
TCTCAAAGGTCACCTG
 A C G T A C G T T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAAAAGTCTCGC
CCATATGT-----
 T C A G A G T C T C G A C T G A G T C A C G T A A C T G A C G T G A T C G A C T T A G C A C T G G A T C
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T