Information for 13-CCKSMAGAGGGCRGAG (Motif 23)

G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G C T A C T G A G T C G A T C G T A C A G C T A G T C G C A T A C T G A T C G G T C A T A C G C A T G
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.690
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif176.3
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets44.2 +/- 25.9bp
Average Position of motif in Background51.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCKSMAGAGGGCRGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.72
Offset:5
Orientation:forward strand
Alignment:CCKSMAGAGGGCRGAG-
-----RGKGGGCGGAGC
 G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCKSMAGAGGGCRGAG---
GCCASCAGGGGGCGCYVNNG
 A C G T G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CCKSMAGAGGGCRGAG---
-----AGGGGGCGGGGCTG
 G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCKSMAGAGGGCRGAG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCKSMAGAGGGCRGAG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCKSMAGAGGGCRGAG-
------GGGGGCGGGGC
 G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCKSMAGAGGGCRGAG
---CAAGATGGCGGC-
 G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCKSMAGAGGGCRGAG-
---GGCGGGGGCGGGGG
 G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G A C G T
A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCKSMAGAGGGCRGAG-
--GGGNGGGGGCGGGGC
 G A T C A T G C C A G T A T G C T G A C C G T A A C T G C T G A C A T G C T A G A C T G T G A C C T G A A C T G G T C A A C T G A C G T
A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C