Information for 12-CKCWGTSWSTCACWGY (Motif 22)

G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
Reverse Opposite:
C T G A T G A C C G A T A T C G A C G T T C A G C G T A T A C G C G A T T A G C G T C A A G T C C G T A A C T G G T C A C A T G
p-value:1e-9
log p-value:-2.260e+01
Information Content per bp:1.594
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.50%
Number of Background Sequences with motif597.4
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets53.7 +/- 24.2bp
Average Position of motif in Background49.9 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CKCWGTSWSTCACWGY
-NCTGTCAATCAN---
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CKCWGTSWSTCACWGY
GSCTGTCACTCA----
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CKCWGTSWSTCACWGY
-SCTGTCAVTCAV---
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CKCWGTSWSTCACWGY
--CTGTCTGTCACCT-
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CKCWGTSWSTCACWGY
---NATGAGTCACC--
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CKCWGTSWSTCACWGY
ATTGATGAGTCACCAA
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CKCWGTSWSTCACWGY
---NATGAGTCANN--
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
A C G T A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CKCWGTSWSTCACWGY
---TGTCTGDCACCT-
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

JUND/MA0491.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CKCWGTSWSTCACWGY
---NATGAGTCACN--
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T
A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CKCWGTSWSTCACWGY--
----ATGAGTCATNTNNT
 G T A C C A G T A G T C G C A T C T A G C A G T A T C G G C T A A T G C A C G T A G T C G T C A A T G C G C A T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T