Information for 14-CGCGCCGCTCCCTGAG (Motif 29)

A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
Reverse Opposite:
A T G C A C G T G T A C C G T A A C T G A C T G A C T G T G C A T A C G G T A C A C T G A C T G A T G C A C T G T A G C A T C G
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.817
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.7 +/- 29.1bp
Average Position of motif in Background37.7 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCGCCGCTCCCTGAG
GGCCCCGCCCCC----
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCGCCGCTCCCTGAG
---GCCCCGCCCC---
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGCGCCGCTCCCTGAG
-GCTCCGCCCMCY---
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGCGCCGCTCCCTGAG
---GCCCCACCCA---
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGCGCCGCTCCCTGAG
---GCCMCRCCCH---
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCGCCGCTCCCTGAG-
GGTCCCGCCCCCTTCTC
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCGCCGCTCCCTGAG
--GGCCACRCCCMK--
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CGCGCCGCTCCCTGAG
------GCTCCG----
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCGCCGCTCCCTGAG
-GCCCCGCCCCC----
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCGCCGCTCCCTGAG
-NRGCCCCRCCCHBNN
 A T G C A T C G A G T C A T C G A G T C G T A C A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C T G T G C A A T C G
A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C