Information for 1-AGTGCCAYCTAGTGGY (Motif 1)

C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T
Reverse Opposite:
C T A G A G T C A G T C C G T A A T G C A G C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A A T G C A C G T
p-value:1e-57
log p-value:-1.323e+02
Information Content per bp:1.852
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.74%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets49.0 +/- 25.5bp
Average Position of motif in Background35.4 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--AGTGCCAYCTAGTGGY--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-AGTGCCAYCTAGTGGY--
TAGCGCCCCCTGGTGGCCA
 A C G T C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----AGTGCCAYCTAGTGGY
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGTGCCAYCTAGTGGY
---GCCATCTGTT---
 C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTGCCAYCTAGTGGY
-ATGCCAACC------
 C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGTGCCAYCTAGTGGY
---ACCATCTGTT---
 C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGTGCCAYCTAGTGGY
--TGACACCT------
 C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGTGCCAYCTAGTGGY
---GCCAGCTGBTNB-
 C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T
A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGTGCCAYCTAGTGGY
-ATGCCCACC------
 C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGTGCCAYCTAGTGGY
--TGTCANYT------
 C G T A A T C G A G C T C T A G A G T C A G T C G T C A A G C T A G T C A C G T C T G A A T C G A C G T A C T G A C T G G A C T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T