Information for 3-YTCTCTGAACACAGGC (Motif 11)

A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
Reverse Opposite:
T A C G A G T C T A G C C G A T C T A G C G A T A T C G G C A T A G C T A T G C C T G A A C T G C T G A A T C G C G T A T C A G
p-value:1e-10
log p-value:-2.365e+01
Information Content per bp:1.675
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.4 +/- 27.8bp
Average Position of motif in Background41.8 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:YTCTCTGAACACAGGC
---------CACAGN-
 A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--YTCTCTGAACACAGGC
NNNVCTGWGYAAACASN-
 A C G T A C G T A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:YTCTCTGAACACAGGC
-----GGAACAAAGR-
 A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:YTCTCTGAACACAGGC
-----TGTAAACAGGA
 A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:YTCTCTGAACACAGGC
---GGTGYTGACAGS-
 A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:YTCTCTGAACACAGGC
-------AACAAAGG-
 A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:YTCTCTGAACACAGGC
-----AAACCACAGC-
 A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:YTCTCTGAACACAGGC--
----NTGCCCANNGGTNA
 A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:YTCTCTGAACACAGGC
------GAACAATGGN
 A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:YTCTCTGAACACAGGC
----ATGTAAACADGS
 A G T C G A C T A T G C G A C T G T A C A G C T A T C G T C G A C G T A T A G C C G T A A G T C C G T A A T C G C T A G A T G C
A C G T A C G T A C G T A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C