Information for 8-GGAGTGCTCGGGT (Motif 8)

A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T
Reverse Opposite:
C G T A A T G C A G T C G T A C A C T G C G T A A C T G G T A C C G T A A G T C A C G T G A T C A G T C
p-value:1e-12
log p-value:-2.913e+01
Information Content per bp:1.926
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 28.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGAGTGCTCGGGT-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGCTCGGGT
TTAAGTGCTT----
 A C G T A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGCTCGGGT
TTGAGTGSTT----
 A C G T A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTGCTCGGGT
CTYRAGTGSY-----
 A C G T A C G T A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGAGTGCTCGGGT
TTRAGTGSYK----
 A C G T A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGAGTGCTCGGGT
BTBRAGTGSN-----
 A C G T A C G T A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGAGTGCTCGGGT
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTGCTCGGGT
CTTGAGTGGCT----
 A C G T A C G T A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGAGTGCTCGGGT--
-----GCTCGGSCTC
 A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGAGTGCTCGGGT
-----GCTCCG--
 A C T G C A T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C A C T G A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T