Information for 18-STTTGTKCGC (Motif 30)

A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C
Reverse Opposite:
C T A G A G T C C T A G G T C A T C G A A T G C G T C A C G T A C G T A A T G C
p-value:1e-5
log p-value:-1.231e+01
Information Content per bp:1.748
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.43%
Number of Background Sequences with motif604.6
Percentage of Background Sequences with motif1.43%
Average Position of motif in Targets50.7 +/- 28.3bp
Average Position of motif in Background52.7 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-STTTGTKCGC
YCTTTGTTCC-
 A C G T A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-STTTGTKCGC
CCTTTGTTTT-
 A C G T A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-STTTGTKCGC
CCWTTGTYYB-
 A C G T A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----STTTGTKCGC--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----STTTGTKCGC--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:STTTGTKCGC
CTTTGT----
 A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-STTTGTKCGC----
CCATTGTATGCAAAT
 A C G T A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-STTTGTKCGC
CCWTTGTY---
 A C G T A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----STTTGTKCGC--
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--STTTGTKCGC----
NNNNTTGTGTGCTTNN
 A C G T A C G T A T C G C G A T A C G T A C G T A T C G A G C T C A G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G