Information for 10-GGCGCCATTCAAACGG (Motif 11)

T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
Reverse Opposite:
A G T C T A G C A C T G A C G T A C G T C G A T T C A G G T C A C G T A C G A T A C T G C T A G T A G C T C A G T A G C A T G C
p-value:1e-12
log p-value:-2.808e+01
Information Content per bp:1.662
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.0 +/- 22.3bp
Average Position of motif in Background38.5 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCGCCATTCAAACGG
TTTGGCGCCAAA-------
 A C G T A C G T A C G T T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGCGCCATTCAAACGG
-----NATTCAAAT--
 T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCCATTCAAACGG
NNNNTTGGCGCCGANNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCGCCATTCAAACGG
GTTGCCATGGCAAC--
 T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCGCCATTCAAACGG
----CCAATAAAAC--
 T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCGCCATTCAAACGG
GTTGCCATGGCAACCG
 T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCGCCATTCAAACGG
GTCCGCCATTA------
 A C G T T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCCATTCAAACGG
NNNNTTGGCGCCGANNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.56
Offset:9
Orientation:forward strand
Alignment:GGCGCCATTCAAACGG---
---------NHAACBGYYV
 T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGCGCCATTCAAACGG
---NGCAATTAAA---
 T A C G A T C G A G T C A T C G A G T C G T A C G C T A G A C T C A G T A G T C C G T A C G T A G T C A T G A C A T C G A C T G
A C G T A C G T A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T