Information for 7-GTCACTGAAA (Motif 9)

A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A
Reverse Opposite:
C G A T C G A T A C G T A G T C G T C A T C A G A G C T C T A G T C G A A G T C
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.735
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.63%
Number of Background Sequences with motif295.3
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets56.0 +/- 25.6bp
Average Position of motif in Background50.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GTCACTGAAA---
---ACTGAAACCA
 A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTCACTGAAA--
GAAAGTGAAAGT
 A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTCACTGAAA--
GAAACTGAAACT
 A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCACTGAAA--
GRAASTGAAAST
 A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCACTGAAA--
GGAAGTGAAAST
 A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCACTGAAA--
GAAAMTGAAACT
 A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCACTGAAA
SCTGTCAVTCAV-
 A C G T A C G T A C G T A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCACTGAAA
NCTGTCAATCAN-
 A C G T A C G T A C G T A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCACTGAAA--
TCCGTCGCTTAAAAG
 A C G T A C G T A C G T A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCACTGAAA
GSCTGTCACTCA--
 A C G T A C G T A C G T A C G T A C T G A G C T G A T C C T G A A G T C A C G T T C A G G T C A C G T A C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T