Information for 9-GTTTCATTTYTAA (Motif 7)

C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C T G A C G T A C G T A C G T A C G A T A C T G C G T A G T C A C G T A A G T C
p-value:1e-13
log p-value:-3.047e+01
Information Content per bp:1.857
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.1 +/- 24.5bp
Average Position of motif in Background49.7 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTTTCATTTYTAA
AGTTTCAKTTTC--
 A C G T C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCATTTYTAA
CAGTTTCGNTTCTN-
 A C G T A C G T C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTTTCATTTYTAA
ACTTTCGTTTCT--
 A C G T C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTTTCATTTYTAA--
--TTAATGTTTAACC
 C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTTTCATTTYTAA
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTTTCATTTYTAA
GTTTCACTTCCG-
 C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCATTTYTAA
ASTTTCASTTYC--
 A C G T C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCATTTYTAA
ASTTTCACTTCC--
 A C G T C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTTTCATTTYTAA---
NAGTTTCABTHTGACTNW
 A C G T A C G T C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCATTTYTAA-
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A G C T C G A T C G T A C G T A A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C