Information for 15-GTCTGTAGGTGGC (Motif 16)

A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G T C A G T C A C G T G T C A A G T C C G T A A C T G G T C A A G T C
p-value:1e-6
log p-value:-1.382e+01
Information Content per bp:1.949
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.0 +/- 16.5bp
Average Position of motif in Background36.4 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCTGTAGGTGGC-------
GCCASCAGGGGGCGCYVNNG
 A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCTGTAGGTGGC----
-NNTGTAGGTAGCANNT
 A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCTGTAGGTGGC-
--SDGCAGGTGCNS
 A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTAGGTGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGTAGGTGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GTCTGTAGGTGGC-
------AGGTGTCA
 A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTCTGTAGGTGGC
----TTAAGTGGT
 A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCTGTAGGTGGC----
NTNNTTAAGTGGNTNAN
 A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTCTGTAGGTGGC
VBSYGTCTGG-------
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GTCTGTAGGTGGC
----TTAAGTGGN
 A C T G A C G T A G T C A C G T A C T G A C G T C G T A C T A G A C T G A C G T A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T