Information for 13-GAGGGAGCCCTAA (Motif 12)

A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A
Reverse Opposite:
A G C T A C G T T C G A A C T G A C T G A C T G G T A C A C G T A T G C A G T C A G T C A C G T A G T C
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.864
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.7 +/- 28.7bp
Average Position of motif in Background25.9 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGCCCTAA-
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGGGAGCCCTAA
--CGGAGC-----
 A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGGGAGCCCTAA
--GGGAGGACNG-
 A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGCCCTAA
GGGCGGGAAGG----
 A C G T A C G T A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAGCCCTAA
GGGGGAATCCCC--
 A C G T A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGCCCTAA
GGGCGGGACC-----
 A C G T A C G T A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAGGGAGCCCTAA-
----GAGSCCGAGC
 A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGGGAGCCCTAA-------
GAAGTANCACGAATNMRAGT
 A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAGCCCTAA
GGCGGGAARN----
 A C G T A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGAGCCCTAA---
NNNNTGAGCACTGTNNG
 A C G T A C T G C G T A A C T G A C T G A T C G C G T A A C T G A G T C G T A C A G T C A C G T C G T A C T G A A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G