Information for 5-AAGTGTTGAA (Motif 3)

T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A
Reverse Opposite:
A G C T A C G T T G A C C G T A G C T A G A T C C T G A A G T C C A G T A C G T
p-value:1e-15
log p-value:-3.531e+01
Information Content per bp:1.697
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif679.5
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets54.6 +/- 27.3bp
Average Position of motif in Background49.4 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGTGTTGAA-
-NATGTTGCAA
 T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A A C G T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTTGAA----
NAAANTTATTGAANCAN
 A C G T A C G T A C G T T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGTGTTGAA
TTRAGTGSYK--
 A C G T A C G T T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGTGTTGAA---
-GGTGYTGACAGS
 T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A A C G T A C G T A C G T
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAGTGTTGAA------
NNNTATTGAATTGNNN
 T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTTGAA
NTCAAGTGGN---
 A C G T A C G T A C G T T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTTGAA
TTAAGTGGT---
 A C G T A C G T T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTTGAA
TTAAGTGGN---
 A C G T A C G T T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTTGAA
TTAAGTGCTT--
 A C G T A C G T T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTTGAA
NTCAAGTGG----
 A C G T A C G T A C G T T G C A G T C A C T A G G A C T C T A G C G A T A C G T A C T G T G C A C T G A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T