Information for 8-AGGCTCGCTG (Motif 11)

C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G
Reverse Opposite:
A G T C C G T A A T C G A G T C A C T G C G T A A C T G A G T C A G T C A G C T
p-value:1e-10
log p-value:-2.326e+01
Information Content per bp:1.848
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif71.6
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets49.6 +/- 25.2bp
Average Position of motif in Background56.3 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGGCTCGCTG
-GGCGCGCT-
 C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGGCTCGCTG-
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A C G T C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGCTCGCTG
-NGCTN----
 C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGGCTCGCTG-
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGGCTCGCTG--
NNAATTCTCGNTNAN
 A C G T A C G T A C G T C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGGCTCGCTG---
---CCTGCTGAGH
 C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGCTCGCTG
TBGCACGCAA
 C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGGCTCGCTG
TWGTCTGV---
 A C G T C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGGCTCGCTG
--GCTCCG--
 C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGGCTCGCTG-
GTCACGCTCNCTGA
 A C G T A C G T A C G T C T G A A C T G C T A G A G T C C G A T G T A C A C T G A T G C C G A T T C A G A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A