Information for 1-TAAAAGCCAG (Motif 9)

C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G T C A G A T G C C G A T A G C T A C G T A C G T G T C A
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.849
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.42%
Number of Background Sequences with motif201.9
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets51.2 +/- 23.8bp
Average Position of motif in Background47.1 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAAAAGCCAG
-AAAAGTCAA
 C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TAAAAGCCAG---
---ATGCCAGACN
 C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TAAAAGCCAG
ANGNAAAGGTCA-
 A C G T A C G T A C G T C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAAGCCAG
GNCTATAAAAGG---
 A C G T A C G T A C G T A C G T A C G T C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAAAAGCCAG--
TGACANARRCCAGRC
 A C G T A C G T A C G T C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAAAAGCCAG
CAAAGGTCAG
 C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAAAAGCCAG--
GTATAAAAGGCGGGG
 A C G T A C G T A C G T C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAAAAGCCAG--
GTATAAAAGGCGGGG
 A C G T A C G T A C G T C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TAAAAGCCAG
----TGCCAA
 C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAAAAGCCAG-
--CGTGCCAAG
 C A G T C G T A C G T A C T G A C G T A A T C G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G