Information for 5-TTACCCAAAATAHTGG (Motif 7)

C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A C A G T A C G T C T G A A C G T C G A T A C G T A G C T C T A G C T A G A C T G A C G T C G T A G C T A
p-value:1e-10
log p-value:-2.372e+01
Information Content per bp:1.777
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 28.8bp
Average Position of motif in Background71.7 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TTACCCAAAATAHTGG
------VRAACAATGG
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TTACCCAAAATAHTGG
------AAAACAATGG
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTACCCAAAATAHTGG
---CCAAAAATAG---
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G
A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:forward strand
Alignment:TTACCCAAAATAHTGG-
-------RAACAATGGN
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTACCCAAAATAHTGG-
AACACCAAAACAAAGGA
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TTACCCAAAATAHTGG
-------GAACAATGG
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTACCCAAAATAHTGG
-TACTGGAAAAAAAA-
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTACCCAAAATAHTGG
--KCCAAAAATAGC--
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G
A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTACCCAAAATAHTGG
--DCYAAAAATAGM--
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G
A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TTACCCAAAATAHTGG-
-------GAACAATGGN
 C G A T C G A T G T C A A G T C A G T C A G T C C T G A C G T A C G T A C G T A A G C T C G T A G C T A A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G