Information for 7-GAAGGCCCGC (Motif 24)

A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G A C T G A G T C A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.098e+01
Information Content per bp:1.946
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets31.0 +/- 20.6bp
Average Position of motif in Background67.8 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAAGGCCCGC---
ATAAAGGCGCGCGAT
 A C G T A C G T A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAAGGCCCGC---
ATAAGGGCGCGCGAT
 A C G T A C G T A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGCCCGC
GGAAANCCCC-
 A C G T A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAAGGCCCGC-
---GGCGCGCT
 A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C A C G T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAGGCCCGC
--AGGCCTNG
 A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAGGCCCGC--
CAACGTCCGCGG
 A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAGGCCCGC-------
TACGCCCCGCCACTCTG
 A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAAGGCCCGC--------
---GCCCCGCCCCCTCCC
 A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAAGGCCCGC---
---TACCCGCATN
 A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGGCCCGC------
TCGTACCCGCATCATT
 A C T G C G T A G T C A C T A G A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T