Information for 7-CCGAGAMGGGGAVGCT (Motif 10)

G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T
Reverse Opposite:
G C T A A C T G A T G C A C T G A C G T A G T C A G T C A T G C A G T C C A T G A C G T A T G C A G C T A G T C C A T G A C T G
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.690
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets41.0 +/- 17.8bp
Average Position of motif in Background47.5 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCGAGAMGGGGAVGCT
------TGGGGA----
 G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCGAGAMGGGGAVGCT-
-----NCGCGGACGTTG
 G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCGAGAMGGGGAVGCT
-GGGGGCGGGGC----
 G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGAMGGGGAVGCT---
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCGAGAMGGGGAVGCT--
--NNTNAGGGGCGGNNNN
 G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CCGAGAMGGGGAVGCT
-GGGGGCGGGGCC---
 G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGAMGGGGAVGCT
NNNACCGAGAGTNNN-----
 A C G T A C G T A C G T A C G T G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CCGAGAMGGGGAVGCT
CACAGCAGGGGG----
 G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGAMGGGGAVGCT
GNNACCGAGAATNNN-----
 A C G T A C G T A C G T A C G T G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGAMGGGGAVGCT
DCHCAGCAGGRGGCC--
 A C G T G T A C G A T C A C T G C T G A A T C G G T C A G T A C C T A G A T C G C T A G C T A G G T C A T G A C T A C G A G T C C G A T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T